Difference between revisions of "ERFs of environmental pollutants"
From Testiwiki
m (→Answer) |
(code back to Ovariable save and objects.latest) |
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library(ggplot2) # A package with fancy graph formats | library(ggplot2) # A package with fancy graph formats | ||
− | + | objects.latest("Op_en5827", "calculations") # Get the latest ovariables from code calculations on page Op_en5918. | |
− | |||
− | |||
ERF <- EvalOutput(ERF, N = 3) | ERF <- EvalOutput(ERF, N = 3) | ||
ERF@output$ERFResult <- as.numeric(as.character(ERF@output$ERFResult)) | ERF@output$ERFResult <- as.numeric(as.character(ERF@output$ERFResult)) | ||
+ | ERF@output <- ERF@output[colnames(ERF@output) != "Obs"] | ||
− | print(xtable(ERF@output), type = 'html') | + | print(xtable(ERF@output, digits = 4), type = 'html') |
ggplot(ERF@output[ERF@output$ERF.Parameter == "RR" , ], # Show a bar chart | ggplot(ERF@output[ERF@output$ERF.Parameter == "RR" , ], # Show a bar chart | ||
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===Calculations=== | ===Calculations=== | ||
− | <rcode> | + | <rcode name="calculations"> |
library(OpasnetUtils) | library(OpasnetUtils) | ||
library(xtable) | library(xtable) | ||
library(ggplot2) | library(ggplot2) | ||
− | ERF <- Ovariable("ERF", ddata = "Op_en5827") | + | ERF <- Ovariable("ERF", ddata = "Op_en5827", getddata = FALSE, save = TRUE) |
ERF@data <- ERF@data[colnames(ERF@data) != "Obs"] | ERF@data <- ERF@data[colnames(ERF@data) != "Obs"] | ||
− | + | cat("Ovariable ERF saved. Page: Op_en5827, code: calculations.\n") | |
− | |||
− | cat("Ovariable ERF saved. | ||
ERF <- EvalOutput(ERF, N = 3) | ERF <- EvalOutput(ERF, N = 3) | ||
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===Data=== | ===Data=== | ||
− | <t2b index="Pollutant,Health.impact, | + | <t2b index="Pollutant,Health.impact,Population,Age,Sex,Response.metric,ERF.Parameter,Observation" |
− | Locations="Unit,Result,Description" unit=" | + | Locations="Unit,Result,Description" unit="-"> |
Indoor air radon|Lung cancer|Whole population|||Incidences|RR|m3 /Bq|1.0005; 1.0016; 1.0031| | Indoor air radon|Lung cancer|Whole population|||Incidences|RR|m3 /Bq|1.0005; 1.0016; 1.0031| | ||
PM2.5|Lung cancer|Whole population|||Incidences|RR|m3 /µg|1.04; 1.14; 1.23|Outdoor air | PM2.5|Lung cancer|Whole population|||Incidences|RR|m3 /µg|1.04; 1.14; 1.23|Outdoor air | ||
Line 71: | Line 68: | ||
Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Incidences|RR|L /net rev|1; 1.000029; 1.000072| | Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Incidences|RR|L /net rev|1; 1.000029; 1.000072| | ||
Arsenic|Bladder cancer|People using water from bore wells|||Incidences|RR|L /ug|1; 1.002; 1.006| | Arsenic|Bladder cancer|People using water from bore wells|||Incidences|RR|L /ug|1; 1.002; 1.006| | ||
− | Arsenic| | + | Arsenic|Bladder cancer|People using wellwater in Pirkanmaa|||Incidences|RR|L /ug|0.999; 1.002; 1.006| |
− | + | Environmental tobacco smoke|Lung cancer|Whole population|||Incidences|RR|Yes/No|1.13; 1.21; 1.30| | |
− | + | Environmental todacco smoke|Coronary heart disease|Whole population|||Mortality|RR|Yes/No|1.19; 1.27; 1.36| | |
− | + | Environmental tobacco smoke|Asthma|Whole population|>21||Incidences|RR|Yes/No|1.19; 1.97; 3.25| | |
− | + | Environmental tobacco smoke|Asthma|Whole population|<14||Incidences|RR|Yes/No|1.24; 1.32; 1.41| | |
− | + | Environmental tobacco smoke|Lung infections|Whole population|<2||Incidences|RR|Yes/No|1.55; 1.42; 1.69| | |
− | + | Environmental tobacco smoke|Middle ear inflammation|Whole population|<3||Incidences|RR|Yes/No|1.38; 1.21; 1.56| | |
Formaldehyde|Asthma|Whole population|<14||Incidences|RR|m3 /µg|1.0140743178| | Formaldehyde|Asthma|Whole population|<14||Incidences|RR|m3 /µg|1.0140743178| | ||
Dampness damage|Asthma|Whole population|||Incidences|RR||1.23; 1.37; 1.53| | Dampness damage|Asthma|Whole population|||Incidences|RR||1.23; 1.37; 1.53| |
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Contents
Question
What are the exposures? relevant to environmental health?
Answer
Relevant results here (in Finnish).
Rationale
Calculations
Data
Obs | Pollutant | Health.impact | Population | Age | Sex | Response.metric | ERF.Parameter | Unit | Result | Description |
---|---|---|---|---|---|---|---|---|---|---|
1 | Indoor air radon | Lung cancer | Whole population | Incidences | RR | m3 /Bq | 1.0005; 1.0016; 1.0031 | |||
2 | PM2.5 | Lung cancer | Whole population | Incidences | RR | m3 /µg | 1.04; 1.14; 1.23 | Outdoor air | ||
3 | PM2.5 | Cardiopulmonary | Whole population | Incidences | RR | 1.03; 1.09; 1.16 | Outdoor air | |||
4 | PM2.5 | All causes | Whole population | Mortality | RR | 1.0014; 1.0062; 1.011 | Outdoor air | |||
5 | Chlorination byproducts | Bladder cancer | People using chlorinated surface water | Incidences | RR | L /µg | 1.00053; 1.0039; 1.00722 | |||
6 | Chlorination byproducts | Bladder cancer | People using chlorinated surface water | Incidences | RR | L /net rev | 1; 1.000029; 1.000072 | |||
7 | Arsenic | Bladder cancer | People using water from bore wells | Incidences | RR | L /ug | 1; 1.002; 1.006 | |||
8 | Arsenic | Bladder cancer | People using wellwater in Pirkanmaa | Incidences | RR | L /ug | 0.999; 1.002; 1.006 | |||
9 | Environmental tobacco smoke | Lung cancer | Whole population | Incidences | RR | Yes/No | 1.13; 1.21; 1.30 | |||
10 | Environmental todacco smoke | Coronary heart disease | Whole population | Mortality | RR | Yes/No | 1.19; 1.27; 1.36 | |||
11 | Environmental tobacco smoke | Asthma | Whole population | >21 | Incidences | RR | Yes/No | 1.19; 1.97; 3.25 | ||
12 | Environmental tobacco smoke | Asthma | Whole population | <14 | Incidences | RR | Yes/No | 1.24; 1.32; 1.41 | ||
13 | Environmental tobacco smoke | Lung infections | Whole population | <2 | Incidences | RR | Yes/No | 1.55; 1.42; 1.69 | ||
14 | Environmental tobacco smoke | Middle ear inflammation | Whole population | <3 | Incidences | RR | Yes/No | 1.38; 1.21; 1.56 | ||
15 | Formaldehyde | Asthma | Whole population | <14 | Incidences | RR | m3 /µg | 1.0140743178 | ||
16 | Dampness damage | Asthma | Whole population | Incidences | RR | 1.23; 1.37; 1.53 | ||||
17 | Dampness damage | Chronic obstructive pulmonary disease | Whole population | Incidences | RR | 1.38; 1.5; 1.86 | ||||
18 | Dampness damage | Upper airway symptoms | Whole population | Incidences | RR | 1.44; 1.7; 2 | ||||
19 | Fluoride | Fluoroosi | People living in Southern Finland using water with fluoride | 0-14 | Incidences | UR | 0.125 | |||
20 | Outdoor ozone | Total mortality | Whole population | Mortality | RR | m3 /ug | 1.000099955; 1.000299596; 1.000399282 | |||
21 | Lead | Decreation of IQ (less than 70 points) | Whole population | Incidences | UR | 0.025 | ||||
22 | Lead | Increased bloodpressure | Whole population | Incidences | UR | 0.025 | ||||
23 | Dioxin | Cancer | Whole population | Incidences | UR | kg /d /pg | 0.000032; 0.000035; 0.00016 | |||
24 | Formaldehyde | Nose-pharynx cancers | Whole population | Incidences | UR | m3 /ug | 0.000013 | |||
25 | Formaldehyde at work | Nose-pharynx cancers | Population at working age | Incidences | UR | m3 /ug | 0.000013 | |||
26 | Benzene | Leukemia | Whole population | Incidences | UR | m3 /ug | 0.000005 | |||
27 | Benzene at work | Leukemia | Population at working age | Incidences | UR | m3 /ug | 0.000005 | |||
28 | Quatzdust | Silicosis | Population at working age | Incidences | UR | m3 /mg | 0.125; 0.125; 0.25 | |||
29 | Asbest at work | Lung cancer and mesothelioma | People at working age | Incidences | UR | 0.01; 0.05; 0.1 | ||||
30 | Noise at work | Hearing damage | People at working age | Incidences | UR | 570 | Medium noise (80-85 dB) | |||
31 | Noise at work | Hearing damage | People at working age | Incidences | UR | 1320 | Loud noise (>85 dB) | |||
32 | Outdoor ozone | Mild decreasing on general funtioning | Whole population | Incidences | UR | m3 /ug | 0.044; 0.115; 0.186 |
--# : Check some translations (chlorinating, surrounding's tobacco smoke, fluorosis, dampness damage,Nose-pharynx cancers, Mild decreasing on general funtioning) --Heta 18:43, 12 October 2012 (EEST)
See also
- Seturi (in Finnish)
References
Related files
<mfanonymousfilelist></mfanonymousfilelist>