Difference between revisions of "ERFs of environmental pollutants"

Revision as of 12:37, 6 February 2013

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Question

What are the exposures? relevant to environmental health?

Answer

Relevant results here (in Finnish).

+ Show code - Hide code

library(OpasnetUtils) # A package with Opasnet functionalities
library(xtable)       # A package with table formats
library(ggplot2)      # A package with fancy graph formats

objects.latest("Op_en5827", "calculations") # Get the latest ovariables from code calculations on page Op_en5918.

ERF 		<- EvalOutput(ERF, N = 3)
ERF@output$ERFResult <- as.numeric(as.character(ERF@output$ERFResult))
ERF@output <- ERF@output[colnames(ERF@output) != "Obs"]

print(xtable(ERF@output, digits = 4), type = 'html')

ggplot(ERF@output[ERF@output$ERF.Parameter == "RR" , ], # Show a bar chart
	aes(x = Pollutant, y = ERFResult, fill = Response.metric)) +
	geom_bar(position="dodge") + 
	theme_grey(base_size = 24) +
	theme(axis.text.x = element_text(angle = 90, hjust = 1))

ggplot(ERF@output[ERF@output$ERF.Parameter == "UR" , ], # Show a bar chart
	aes(x = Health.impact, y = ERFResult, fill = Response.metric)) +
	geom_bar(position="dodge") + 
	theme_grey(base_size = 24) +
	theme(axis.text.x = element_text(angle = 90, hjust = 1))

Rationale

Calculations

+ Show code - Hide code

library(OpasnetUtils)
library(xtable)
library(ggplot2)

ERF <- Ovariable("ERF", ddata = "Op_en5827", getddata = FALSE, save = TRUE)
ERF@data <- ERF@data[colnames(ERF@data) != "Obs"]

cat("Ovariable ERF saved. Page: Op_en5827, code: calculations.\n")

ERF <- EvalOutput(ERF, N = 3)

print(xtable(ERF@output), type = 'html') # Show a result table

Data

Difference between revisions of "ERFs of environmental pollutants"(-)
Obs	Pollutant	Disease	Population	Age	Response.metric	ERF.Parameter	Unit	Result	Description
1	Indoor air radon	Lung cancer	Whole population		Morbidity	RR	m3 /Bq	1.0005; 1.0016; 1.0031
2	PM2.5	Lung cancer	Whole population		Morbidity	RR	m3 /µg	1.04; 1.14; 1.23	Outdoor air
3	PM2.5	Cardiopulmonary	Whole population		Morbidity	RR		1.03; 1.09; 1.16	Outdoor air
4	PM2.5	All causes	Whole population		Mortality	RR		1.0014; 1.0062; 1.011	Outdoor air
5	Chlorination byproducts	Bladder cancer	People using chlorinated surface water		Morbidity	RR	L /µg	1.00053; 1.0039; 1.00722
6	Chlorination byproducts	Bladder cancer	People using chlorinated surface water		Morbidity	RR	L /net rev	1; 1.000029; 1.000072
7	Arsenic	Bladder cancer	People using water from bore wells		Morbidity	RR	L /ug	1; 1.002; 1.006
8	Arsenic	Bladder cancer	People using wellwater in Pirkanmaa		Morbidity	RR	L /ug	0.999; 1.002; 1.006
9	Environmental tobacco smoke	Lung cancer	Whole population		Morbidity	RR	Yes/No	1.13; 1.21; 1.30
10	Environmental todacco smoke	Coronary heart disease	Whole population		Mortality	RR	Yes/No	1.19; 1.27; 1.36
11	Environmental tobacco smoke	Asthma	Whole population	>21	Morbidity	RR	Yes/No	1.19; 1.97; 3.25
12	Environmental tobacco smoke	Asthma	Whole population	<14	Morbidity	RR	Yes/No	1.24; 1.32; 1.41
13	Environmental tobacco smoke	Lung infections	Whole population	<2	Morbidity	RR	Yes/No	1.55; 1.42; 1.69
14	Environmental tobacco smoke	Middle ear inflammation	Whole population	<3	Morbidity	RR	Yes/No	1.38; 1.21; 1.56
15	Formaldehyde	Asthma	Whole population	<14	Morbidity	RR	m3 /µg	1.0140743178
16	Dampness damage	Asthma	Whole population		Morbidity	RR		1.23; 1.37; 1.53
17	Dampness damage	Chronic obstructive pulmonary disease	Whole population		Morbidity	RR		1.38; 1.5; 1.86
18	Dampness damage	Upper airway symptoms	Whole population		Morbidity	RR		1.44; 1.7; 2
19	Fluoride	Fluoroosi	People living in Southern Finland using water with fluoride	0-14	Morbidity	UR		0.125
20	Outdoor ozone	Total mortality	Whole population		Mortality	RR	m3 /ug	1.000099955; 1.000299596; 1.000399282
21	Lead	Decreation of IQ (less than 70 points)	Whole population		Morbidity	UR		0.025
22	Lead	Increased bloodpressure	Whole population		Morbidity	UR		0.025
23	Dioxin	Cancer	Whole population		Morbidity	UR	kg /d /pg	0.000032; 0.000035; 0.00016
24	Formaldehyde	Nose-pharynx cancers	Whole population		Morbidity	UR	m3 /ug	0.000013
25	Formaldehyde at work	Nose-pharynx cancers	Population at working age		Morbidity	UR	m3 /ug	0.000013
26	Benzene	Leukemia	Whole population		Morbidity	UR	m3 /ug	0.000005
27	Benzene at work	Leukemia	Population at working age		Morbidity	UR	m3 /ug	0.000005
28	Quatzdust	Silicosis	Population at working age		Morbidity	UR	m3 /mg	0.125; 0.125; 0.25
29	Asbest at work	Lung cancer and mesothelioma	People at working age		Morbidity	UR		0.01; 0.05; 0.1
30	Noise at work	Hearing damage	People at working age		Morbidity	UR		570	Medium noise (80-85 dB)
31	Noise at work	Hearing damage	People at working age		Morbidity	UR		1320	Loud noise (>85 dB)
32	Outdoor ozone	Mild decreasing on general funtioning	Whole population		Morbidity	UR	m3 /ug	0.044; 0.115; 0.186

--# : Check some translations (chlorinating, surrounding's tobacco smoke, fluorosis, dampness damage,Nose-pharynx cancers, Mild decreasing on general funtioning) --Heta 18:43, 12 October 2012 (EEST)

References

Related files

@@ Line 61: / Line 61: @@
 <t2b index="Pollutant,Disease,Population,Age,Sex,Response.metric,ERF.Parameter,Observation"
 Locations="Unit,Result,Description" unit="-">
-Indoor air radon|Lung cancer|Whole population|||Incidences|RR|m3 /Bq|1.0005; 1.0016; 1.0031|
+Indoor air radon|Lung cancer|Whole population|||Morbidity|RR|m3 /Bq|1.0005; 1.0016; 1.0031|
-PM2.5|Lung cancer|Whole population|||Incidences|RR|m3 /µg|1.04; 1.14; 1.23|Outdoor air
+PM2.5|Lung cancer|Whole population|||Morbidity|RR|m3 /µg|1.04; 1.14; 1.23|Outdoor air
-PM2.5|Cardiopulmonary|Whole population|||Incidences|RR||1.03; 1.09; 1.16|Outdoor air
+PM2.5|Cardiopulmonary|Whole population|||Morbidity|RR||1.03; 1.09; 1.16|Outdoor air
 PM2.5|All causes|Whole population|||Mortality|RR||1.0014; 1.0062; 1.011|Outdoor air
-Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Incidences|RR|L /µg|1.00053; 1.0039; 1.00722|
+Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Morbidity|RR|L /µg|1.00053; 1.0039; 1.00722|
-Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Incidences|RR|L /net rev|1; 1.000029; 1.000072|
+Chlorination byproducts|Bladder cancer|People using chlorinated surface water|||Morbidity|RR|L /net rev|1; 1.000029; 1.000072|
-Arsenic|Bladder cancer|People using water from bore wells|||Incidences|RR|L /ug|1; 1.002; 1.006|
+Arsenic|Bladder cancer|People using water from bore wells|||Morbidity|RR|L /ug|1; 1.002; 1.006|
-Arsenic|Bladder cancer|People using wellwater in Pirkanmaa|||Incidences|RR|L /ug|0.999; 1.002; 1.006|
+Arsenic|Bladder cancer|People using wellwater in Pirkanmaa|||Morbidity|RR|L /ug|0.999; 1.002; 1.006|
-Environmental tobacco smoke|Lung cancer|Whole population|||Incidences|RR|Yes/No|1.13; 1.21; 1.30|
+Environmental tobacco smoke|Lung cancer|Whole population|||Morbidity|RR|Yes/No|1.13; 1.21; 1.30|
 Environmental todacco smoke|Coronary heart disease|Whole population|||Mortality|RR|Yes/No|1.19; 1.27; 1.36|
-Environmental tobacco smoke|Asthma|Whole population|>21||Incidences|RR|Yes/No|1.19; 1.97; 3.25|
+Environmental tobacco smoke|Asthma|Whole population|>21||Morbidity|RR|Yes/No|1.19; 1.97; 3.25|
-Environmental tobacco smoke|Asthma|Whole population|<14||Incidences|RR|Yes/No|1.24; 1.32; 1.41|
+Environmental tobacco smoke|Asthma|Whole population|<14||Morbidity|RR|Yes/No|1.24; 1.32; 1.41|
-Environmental tobacco smoke|Lung infections|Whole population|<2||Incidences|RR|Yes/No|1.55; 1.42; 1.69|
+Environmental tobacco smoke|Lung infections|Whole population|<2||Morbidity|RR|Yes/No|1.55; 1.42; 1.69|
-Environmental tobacco smoke|Middle ear inflammation|Whole population|<3||Incidences|RR|Yes/No|1.38; 1.21; 1.56|
+Environmental tobacco smoke|Middle ear inflammation|Whole population|<3||Morbidity|RR|Yes/No|1.38; 1.21; 1.56|
-Formaldehyde|Asthma|Whole population|<14||Incidences|RR|m3 /µg|1.0140743178|
+Formaldehyde|Asthma|Whole population|<14||Morbidity|RR|m3 /µg|1.0140743178|
-Dampness damage|Asthma|Whole population|||Incidences|RR||1.23; 1.37; 1.53|
+Dampness damage|Asthma|Whole population|||Morbidity|RR||1.23; 1.37; 1.53|
-Dampness damage|Chronic obstructive pulmonary disease|Whole population|||Incidences|RR||1.38; 1.5; 1.86|
+Dampness damage|Chronic obstructive pulmonary disease|Whole population|||Morbidity|RR||1.38; 1.5; 1.86|
-Dampness damage|Upper airway symptoms|Whole population|||Incidences|RR||1.44; 1.7; 2|
+Dampness damage|Upper airway symptoms|Whole population|||Morbidity|RR||1.44; 1.7; 2|
-Fluoride|Fluoroosi|People living in Southern Finland using water with fluoride|0-14||Incidences|UR| |0.125|
+Fluoride|Fluoroosi|People living in Southern Finland using water with fluoride|0-14||Morbidity|UR| |0.125|
 Outdoor ozone|Total mortality|Whole population|||Mortality|RR|m3 /ug|1.000099955; 1.000299596; 1.000399282|
-Lead|Decreation of IQ (less than 70 points)|Whole population|||Incidences|UR| |0.025|
+Lead|Decreation of IQ (less than 70 points)|Whole population|||Morbidity|UR| |0.025|
-Lead|Increased bloodpressure|Whole population|||Incidences|UR| |0.025|
+Lead|Increased bloodpressure|Whole population|||Morbidity|UR| |0.025|
-Dioxin|Cancer|Whole population|||Incidences|UR|kg /d /pg|0.000032; 0.000035; 0.00016|
+Dioxin|Cancer|Whole population|||Morbidity|UR|kg /d /pg|0.000032; 0.000035; 0.00016|
-Formaldehyde|Nose-pharynx cancers|Whole population|||Incidences|UR|m3 /ug|0.000013|
+Formaldehyde|Nose-pharynx cancers|Whole population|||Morbidity|UR|m3 /ug|0.000013|
-Formaldehyde at work|Nose-pharynx cancers|Population at working age|||Incidences|UR|m3 /ug|0.000013|
+Formaldehyde at work|Nose-pharynx cancers|Population at working age|||Morbidity|UR|m3 /ug|0.000013|
-Benzene|Leukemia|Whole population|||Incidences|UR|m3 /ug|0.000005|
+Benzene|Leukemia|Whole population|||Morbidity|UR|m3 /ug|0.000005|
-Benzene at work|Leukemia|Population at working age|||Incidences|UR|m3 /ug|0.000005|
+Benzene at work|Leukemia|Population at working age|||Morbidity|UR|m3 /ug|0.000005|
-Quatzdust|Silicosis|Population at working age|||Incidences|UR|m3 /mg|0.125; 0.125; 0.25|
+Quatzdust|Silicosis|Population at working age|||Morbidity|UR|m3 /mg|0.125; 0.125; 0.25|
-Asbest at work|Lung cancer and mesothelioma|People at working age|||Incidences|UR| |0.01; 0.05; 0.1|
+Asbest at work|Lung cancer and mesothelioma|People at working age|||Morbidity|UR| |0.01; 0.05; 0.1|
-Noise at work|Hearing damage|People at working age|||Incidences|UR| |570|Medium noise (80-85 dB)
+Noise at work|Hearing damage|People at working age|||Morbidity|UR| |570|Medium noise (80-85 dB)
-Noise at work|Hearing damage|People at working age|||Incidences|UR| |1320|Loud noise (>85 dB)
+Noise at work|Hearing damage|People at working age|||Morbidity|UR| |1320|Loud noise (>85 dB)
-Outdoor ozone|Mild decreasing on general funtioning|Whole population|||Incidences|UR|m3 /ug|0.044; 0.115; 0.186|
+Outdoor ozone|Mild decreasing on general funtioning|Whole population|||Morbidity|UR|m3 /ug|0.044; 0.115; 0.186|
 </t2b>

Difference between revisions of "ERFs of environmental pollutants"

Revision as of 12:37, 6 February 2013

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Data

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