Difference between revisions of "Food intake in Finland"

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(Calculations: code works)
(See also: food data from FI DK ES uploaded)
 
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[[Category:Beneris]]
 
[[Category:Beneris]]
 
[[Category:Intake]]
 
[[Category:Intake]]
 +
[[Category:Contains R code]]
 
{{variable}}
 
{{variable}}
  
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==Answer==
 
==Answer==
 +
 +
* [http://en.opasnet.org/en-opwiki/index.php/Special:R-tools?id=crAJyAlr9taPQlIG Fish intake per age group]
 +
** [http://194.187.214.42/rtools_server/runs/crAJyAlr9taPQlIG_plot001.png Larger graph]
  
 
<rcode graphics="1">
 
<rcode graphics="1">
 +
library(OpasnetUtils)
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library(ggplot2)
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objects.get("84Sg6BQDs7potVJr")
 +
 +
#oprint(head(foodFI))
 +
 +
fishlong <- c(
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"Atlantic salmon (Salmo salar)",
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"Baltic herring (Clupea harengus membras)",
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"Fish and other seafood(by species, these are examples - variation by country):",
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"Herring (Clupea harengus)",
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"Pike (Esox lucius)",
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"Rainbow trout (Onchorchys mykiss)"
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)
 +
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fishshort <- c(
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"Atlantic salmon",
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"Baltic herring",
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"Fish and seafood",
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"Herring",
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"Pike",
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"Rainbow trout"
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)
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# Why do we need to reorder the factor? It should be ordered already.
 +
 +
age =  c("6 mo", "7 mo", "8 mo", "9 mo", "7-11 mo", "10 mo", "11 mo", "1", "2", "3", "4-5", "6-9", "10-13", "14-17",
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"18-24", "25-34", "35-44", "45-54", "55-64", "65-74")
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foodFI$Age <- factor(foodFI$Age, age, ordered = TRUE)
 +
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#levels(foodFI$Food)[levels(foodFI$Food) %in% fishlong]
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levels(foodFI$Food)[levels(foodFI$Food) %in% fishlong] <- fishshort
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cat("Fish intake data based on results from Beneris project (child data mainly from DIPP study.)\n")
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#head(foodFI[foodFI$Food %in% fishshort , ])
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ggplot(foodFI[foodFI$Parameter == "Fractile0.5" & foodFI$Food == fishshort , ], aes(x = Age, y = Result)) + #
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geom_point(aes(colour = Food)) +
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theme_grey(base_size = 24) +
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theme(axis.text.x = element_text(angle = 90, hjust = 1))
  
 
</rcode>
 
</rcode>
+
 
 
== Rationale ==
 
== Rationale ==
  
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fooddata2 <- importFoodTables(
 
fooddata2 <- importFoodTables(
 
obs = list(4:16, 19:31),
 
obs = list(4:16, 19:31),
block =  list(3:10, 12:19, 21:28, 30:37, 39:46, 48:55, 57:64, c(65, 65:71), 73:80, 82:89, 91:98, 100:107, 109:116, 118:125, 127:134, 136:143, 151:158, 160:167, 169:176, 178:185),
+
block =  list(3:10, 12:19, 21:28, 30:37, 39:46, 48:55, 57:64, c(65, 65:71), 73:80, 82:89, 91:98, 100:107, 109:116,  
age =  c("6 mo", "7 mo", "8 mo", "9 mo", "10 mo", "11 mo", "1", "7-11 mo", "2", "3", "4-5", "6-9", "10-13", "14-17", "18-24", "25-34", "35-44", "45-54", "55-64", "65-74")
+
118:125, 127:134, 136:143, 151:158, 160:167, 169:176, 178:185),
 +
age =  c("6 mo", "7 mo", "8 mo", "9 mo", "10 mo", "11 mo", "1", "7-11 mo", "2", "3", "4-5", "6-9", "10-13", "14-17",  
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"18-24", "25-34", "35-44", "45-54", "55-64", "65-74")
 
)
 
)
  
fooddata <- rbind(fooddata1, fooddata2)
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foodFI <- rbind(fooddata1, fooddata2)
  
oprint(head(fooddata))
+
oprint(head(foodFI))
  
 
temp <- fooddata2
 
temp <- fooddata2
temp <- temp[temp$Parameter == "Fractile0.5" & temp$Food %in% c("Fish and other seafood(by species, these are examples - variation by country):", "Baltic herring (Clupea harengus membras)", "Herring (Clupea harengus)", "Pike (Esox lucius)", "Rainbow trout (Onchorchys mykiss)", "Atlantic salmon (Salmo salar)") , ]
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temp <- temp[temp$Parameter == "Fractile0.5" &  
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temp$Food %in% c(
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"Fish and other seafood(by species, these are examples - variation by country):",  
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"Baltic herring (Clupea harengus membras)",  
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"Herring (Clupea harengus)",  
 +
"Pike (Esox lucius)",  
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"Rainbow trout (Onchorchys mykiss)",  
 +
"Atlantic salmon (Salmo salar)"
 +
) , ]
  
 
oprint(head(temp))
 
oprint(head(temp))
 
ggplot(temp, aes(x = Age, y = Result)) + geom_point(aes(colour = Food)) + theme_grey(base_size = 24)
 
ggplot(temp, aes(x = Age, y = Result)) + geom_point(aes(colour = Food)) + theme_grey(base_size = 24)
 +
 +
objects.put(foodFI)
 +
 +
cat("Object foodFI saved.\n")
  
 
</rcode>
 
</rcode>
Line 125: Line 185:
 
* [[Food intake in Spain]]
 
* [[Food intake in Spain]]
 
* [[Food intake in Denmark]]
 
* [[Food intake in Denmark]]
 +
* {{#l:Food consumption_FINLAND.xls}}
 +
* {{#l:Beneris_Food consumption pregnant women_FINLAND_300507_th.xls}}
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* {{#l:Beneris_Food consumption_SPAIN_130407_lr.xls}}
 +
* {{#l:Fish consumption and POPs_IRELAND.xls}}
 +
* {{#l:Food consumption_DK.xls}}
  
 
==References==
 
==References==
  
 
<references/>
 
<references/>

Latest revision as of 15:45, 15 April 2016



Question

What is intake of different food items (especially fish) in Finland in age groups 0-64 years?

Answer

+ Show code

Rationale

Data

The data contains:

a) Main food groups (ingredient level, classification used in EPIC)

b) Nutrients

c) Nutrient supplements

d) Fish and other seafood by species


Age groups are: 0, 1, 2, 3, 4-5, 6-9, 10-13, 14-17, 18-24, 25-34, 35-44, 45-54, 55-64,

The data here is generated from the DIPP study, a Type 1 Diabetes Prediction and Prevention (DIPP) project in Finland, where the cohort of 5993 children (77 % of those invited) participated in the main study, and 117 randomly selected infants in the validation study. [1] [2] This was carried out in the university hospitals of Turku, Tampere and Oulu.[3]


Unit

g/day AMONG THOSE WHO USE THIS PRODUCT

Calculations

+ Show code

See also

References

  1. Virtanen SM, Aro A. Dietary factors in the aetiology of diabetes. Ann Med 1994;26:469-478. Virtanen et al 1994
  2. Virtanen SM, Knip M. Nutritional risk predictors of beta-cell autoimmunity and type 1 diabetes at a young age. Am J Clin Nutr 2003;78:1053-67. Virtanen et al 2003
  3. DIPP study
  4. File is also in N:\YTOS\Projects\BENERIS\WP2\Datat pyydetyssa muodossa\Food consumption_FINLAND.xls (original data accessible only for the THL))
  5. D18 Subpopulation intakes. The Excel data file is in N:\YMTO\PROJECTS\BENERIS\Admin\Deliverables\D18 Subpopulation intakes\Beneris_D18_subpopulation_intakes_Finland_th.xls.